Basic Information
Gene ID
Position
scaffold168277:122859-127417 (-)
4558bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the syntaxin family
Organism
Also AS AT1G61290

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_33254.g SNAP25 homologous protein
PITA_20736.g Vesicle transport v-SNARE
PITA_25976.g Vesicle transport v-SNARE
Regulatory gene
PITA_00226.g Belongs to the GRAS family
PITA_00931.g Transcription factor
PITA_01314.g Belongs to the GRAS family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000149 SNARE binding MF
GO:0001505 regulation of neurotransmitter levels BP
GO:0001956 positive regulation of neurotransmitter secretion BP
GO:0003008 system process BP
GO:0003674 molecular_function MF
GO:0005484 SNAP receptor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005856 cytoskeleton CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006810 transport BP
GO:0006836 neurotransmitter transport BP
GO:0006886 intracellular protein transport BP
GO:0006887 exocytosis BP
GO:0006904 vesicle docking involved in exocytosis BP
GO:0006906 vesicle fusion BP
GO:0006996 organelle organization BP
GO:0007154 cell communication BP
GO:0007267 cell-cell signaling BP
GO:0007268 chemical synaptic transmission BP
GO:0007269 neurotransmitter secretion BP
GO:0007610 behavior BP
GO:0007611 learning or memory BP
GO:0007613 memory BP
GO:0007614 short-term memory BP
GO:0008021 synaptic vesicle CC
GO:0008092 cytoskeletal protein binding MF
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009504 cell plate CC
GO:0009506 plasmodesma CC
GO:0009524 phragmoplast CC
GO:0009628 response to abiotic stimulus BP
GO:0009629 response to gravity BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010646 regulation of cell communication BP
GO:0010647 positive regulation of cell communication BP
GO:0010701 positive regulation of norepinephrine secretion BP
GO:0012505 endomembrane system CC
GO:0012506 vesicle membrane CC
GO:0014061 regulation of norepinephrine secretion BP
GO:0014069 postsynaptic density CC
GO:0015031 protein transport BP
GO:0015629 actin cytoskeleton CC
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016079 synaptic vesicle exocytosis BP
GO:0016081 synaptic vesicle docking BP
GO:0016192 vesicle-mediated transport BP
GO:0017022 myosin binding MF
GO:0017156 calcium-ion regulated exocytosis BP
GO:0017157 regulation of exocytosis BP
GO:0017158 regulation of calcium ion-dependent exocytosis BP
GO:0019904 protein domain specific binding MF
GO:0022406 membrane docking BP
GO:0022607 cellular component assembly BP
GO:0023051 regulation of signaling BP
GO:0023052 signaling BP
GO:0023056 positive regulation of signaling BP
GO:0023061 signal release BP
GO:0030054 cell junction CC
GO:0030133 transport vesicle CC
GO:0030141 secretory granule CC
GO:0030658 transport vesicle membrane CC
GO:0030659 cytoplasmic vesicle membrane CC
GO:0030672 synaptic vesicle membrane CC
GO:0030674 protein-macromolecule adaptor activity MF
GO:0031090 organelle membrane CC
GO:0031201 SNARE complex CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031629 synaptic vesicle fusion to presynaptic active zone membrane BP
GO:0031644 regulation of nervous system process BP
GO:0031982 vesicle CC
GO:0032028 myosin head/neck binding MF
GO:0032036 myosin heavy chain binding MF
GO:0032279 asymmetric synapse CC
GO:0032501 multicellular organismal process BP
GO:0032879 regulation of localization BP
GO:0032940 secretion by cell BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033605 positive regulation of catecholamine secretion BP
GO:0034613 protein localization BP
GO:0034622 protein-containing complex assembly BP
GO:0035493 SNARE complex assembly BP
GO:0042391 regulation of membrane potential BP
GO:0042641 actomyosin CC
GO:0042734 presynaptic membrane CC
GO:0042886 amide transport BP
GO:0043008 ATP-dependent protein binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044057 regulation of system process BP
GO:0044085 cellular component biogenesis BP
GO:0044325 transmembrane transporter binding MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044456 obsolete synapse part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0045026 plasma membrane fusion BP
GO:0045055 regulated exocytosis BP
GO:0045184 establishment of protein localization BP
GO:0045202 synapse CC
GO:0045921 positive regulation of exocytosis BP
GO:0045956 positive regulation of calcium ion-dependent exocytosis BP
GO:0046903 secretion BP
GO:0046907 intracellular transport BP
GO:0046928 regulation of neurotransmitter secretion BP
GO:0046982 protein heterodimerization activity MF
GO:0046983 protein dimerization activity MF
GO:0047485 obsolete protein N-terminus binding MF
GO:0048278 vesicle docking BP
GO:0048284 organelle fusion BP
GO:0048306 calcium-dependent protein binding MF
GO:0048489 synaptic vesicle transport BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048786 presynaptic active zone CC
GO:0048787 presynaptic active zone membrane CC
GO:0050433 regulation of catecholamine secretion BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050804 modulation of chemical synaptic transmission BP
GO:0050806 positive regulation of synaptic transmission BP
GO:0050877 nervous system process BP
GO:0050890 cognition BP
GO:0050896 response to stimulus BP
GO:0051046 regulation of secretion BP
GO:0051047 positive regulation of secretion BP
GO:0051049 regulation of transport BP
GO:0051050 positive regulation of transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051588 regulation of neurotransmitter transport BP
GO:0051590 positive regulation of neurotransmitter transport BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051648 vesicle localization BP
GO:0051649 establishment of localization in cell BP
GO:0051650 establishment of vesicle localization BP
GO:0051656 establishment of organelle localization BP
GO:0051952 regulation of amine transport BP
GO:0051954 positive regulation of amine transport BP
GO:0055044 symplast CC
GO:0060090 molecular adaptor activity MF
GO:0060341 regulation of cellular localization BP
GO:0060627 regulation of vesicle-mediated transport BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070032 synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex CC
GO:0070033 synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex CC
GO:0070044 synaptobrevin 2-SNAP-25-syntaxin-1a complex CC
GO:0070382 exocytic vesicle CC
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072657 protein localization to membrane BP
GO:0090174 organelle membrane fusion BP
GO:0097060 synaptic membrane CC
GO:0097458 obsolete neuron part CC
GO:0097479 synaptic vesicle localization BP
GO:0097480 establishment of synaptic vesicle localization BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098590 plasma membrane region CC
GO:0098793 presynapse CC
GO:0098794 postsynapse CC
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:0098815 modulation of excitatory postsynaptic potential BP
GO:0098916 anterograde trans-synaptic signaling BP
GO:0098984 neuron to neuron synapse CC
GO:0099003 vesicle-mediated transport in synapse BP
GO:0099177 regulation of trans-synaptic signaling BP
GO:0099500 vesicle fusion to plasma membrane BP
GO:0099501 exocytic vesicle membrane CC
GO:0099503 secretory vesicle CC
GO:0099504 synaptic vesicle cycle BP
GO:0099536 synaptic signaling BP
GO:0099537 trans-synaptic signaling BP
GO:0099572 postsynaptic specialization CC
GO:0099643 signal release from synapse BP
GO:0140029 exocytic process BP
GO:0140056 organelle localization by membrane tethering BP
GO:1903305 regulation of regulated secretory pathway BP
GO:1903307 positive regulation of regulated secretory pathway BP
GO:1903530 regulation of secretion by cell BP
GO:1903532 positive regulation of secretion by cell BP
KEGG Term Name Description
map04130 SNARE interactions in vesicular transport -
map04130 SNARE interactions in vesicular transport -