Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
PITA_20716.g
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Position
scaffold229412:121803-124057 (+)
2254bp
Gene Type
gene
Gene Description (Protein Product)
Protein TRANSPARENT TESTA
Organism
Pinus taeda
Also AS AT3G57670

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_31733.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_38227.g bHLH-MYC and R2R3-MYB transcription factors N-terminal
PITA_46305.g BEL1-like homeodomain protein
Regulatory gene
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_00328.g B3 DNA binding domain
PITA_01126.g B3 domain-containing
Target gene
PITA_00001.g N-acetylglucosaminyl transferase component family protein Gpi1 family protein
PITA_00009.g ABC transporter I family member
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)