Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_22214.g
View in Genome Browser
Position
scaffold2305:61394-133304 (-)
71910bp
Gene Type
gene
Gene Description (Protein Product)
"This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor
Organism
Pinus taeda
Also AS AT5G48300

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_36884.g starch synthase 4, chloroplastic
PITA_44315.g Belongs to the glycosyltransferase 1 family. Bacterial plant glycogen synthase subfamily
PITA_28871.g Starch synthase catalytic domain
Regulatory gene
PITA_00548.g Mini zinc finger protein
PITA_00931.g Transcription factor
PITA_10393.g AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000271 polysaccharide biosynthetic process BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0005982 starch metabolic process BP
GO:0006073 cellular glucan metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008878 glucose-1-phosphate adenylyltransferase activity MF
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009250 glucan biosynthetic process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009501 amyloplast CC
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009628 response to abiotic stimulus BP
GO:0009648 photoperiodism BP
GO:0009791 post-embryonic development BP
GO:0009987 cellular process BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0016051 carbohydrate biosynthetic process BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016779 nucleotidyltransferase activity MF
GO:0019252 starch biosynthetic process BP
GO:0022414 reproductive process BP
GO:0030929 ADPG pyrophosphorylase complex CC
GO:0030931 heterotetrameric ADPG pyrophosphorylase complex CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0033692 cellular polysaccharide biosynthetic process BP
GO:0034637 cellular carbohydrate biosynthetic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044042 glucan metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044262 cellular carbohydrate metabolic process BP
GO:0044264 cellular polysaccharide metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048046 apoplast CC
GO:0048573 photoperiodism, flowering BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050896 response to stimulus BP
GO:0061458 reproductive system development BP
GO:0070566 adenylyltransferase activity MF
GO:0071704 organic substance metabolic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00520 Amino sugar and nucleotide sugar metabolism -
map00500 Starch and sucrose metabolism -