Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_24295.g
View in Genome Browser
Position
scaffold20264:173475-174309 (-)
834bp
Gene Type
gene
Gene Description (Protein Product)
Signal peptidase complex subunit 2
Organism
Pinus taeda
Also AS AT2G39960

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_32309.g signal peptidase complex subunit
PITA_50590.g Signal peptidase complex subunit
PITA_27351.g Signal peptidase complex subunit
Regulatory gene
PITA_00296.g Myb-related protein
PITA_00384.g Myb-related protein
PITA_01056.g Myb-like DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005787 signal peptidase complex CC
GO:0005789 endoplasmic reticulum membrane CC
GO:0006465 signal peptide processing BP
GO:0006508 proteolysis BP
GO:0006518 peptide metabolic process BP
GO:0006605 protein targeting BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016485 protein processing BP
GO:0019538 protein metabolic process BP
GO:0031984 organelle subcompartment CC
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034613 protein localization BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0042886 amide transport BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043603 amide metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045047 protein targeting to ER BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051604 protein maturation BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0070727 cellular macromolecule localization BP
GO:0070972 protein localization to endoplasmic reticulum BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0071705 nitrogen compound transport BP
GO:0072594 establishment of protein localization to organelle BP
GO:0072599 establishment of protein localization to endoplasmic reticulum BP
GO:0098796 membrane protein complex CC
GO:0098827 endoplasmic reticulum subcompartment CC
GO:1901564 organonitrogen compound metabolic process BP
GO:1902494 catalytic complex CC
GO:1905368 peptidase complex CC
KEGG Term Name Description
map03060 Protein export The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.