Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_28387.g
View in Genome Browser
Position
scaffold160514:59136-79238 (+)
20102bp
Gene Type
gene
Gene Description (Protein Product)
Cleavage and polyadenylation specificity factor
Organism
Pinus taeda
Also AS AT2G01730

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_43763.g Cleavage and polyadenylation specificity factor
PITA_40634.g Cleavage and polyadenylation specificity factor
PITA_42907.g Cleavage and polyadenylation specificity factor
Regulatory gene
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_00328.g B3 DNA binding domain
PITA_01126.g B3 domain-containing

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000741 karyogamy BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006996 organelle organization BP
GO:0006997 nucleus organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009553 embryo sac development BP
GO:0009559 embryo sac central cell differentiation BP
GO:0009561 megagametogenesis BP
GO:0009987 cellular process BP
GO:0010197 polar nucleus fusion BP
GO:0016043 cellular component organization BP
GO:0030154 cell differentiation BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048229 gametophyte development BP
GO:0048284 organelle fusion BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0071840 cellular component organization or biogenesis BP