PPGR - Gene Detail

Basic Information

Gene ID	PITA_30433.g View in Genome Browser
Position	super1370:286624-521570 (-) 234946bp
Gene Type	gene
Gene Description (Protein Product)	aarF domain-containing protein kinase At1g79600
Organism	Pinus taeda
Also AS	AT3G07700

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

PITA_40470.g RPM1-interacting protein

PITA_45380.g Cleavage site for pathogenic type III effector avirulence factor Avr

PITA_41270.g AarF domain-containing protein kinase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006629	lipid metabolic process	BP
GO:0006643	membrane lipid metabolic process	BP
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0006996	organelle organization	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009058	biosynthetic process	BP
GO:0009507	chloroplast	CC
GO:0009532	plastid stroma	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009535	chloroplast thylakoid membrane	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009579	thylakoid	CC
GO:0009605	response to external stimulus	BP
GO:0009657	plastid organization	BP
GO:0009658	chloroplast organization	BP
GO:0009987	cellular process	BP
GO:0009991	response to extracellular stimulus	BP
GO:0010287	plastoglobule	CC
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0031667	response to nutrient levels	BP
GO:0031976	plastid thylakoid	CC
GO:0031984	organelle subcompartment	CC
GO:0033554	cellular response to stress	BP
GO:0034357	photosynthetic membrane	CC
GO:0034599	cellular response to oxidative stress	BP
GO:0042221	response to chemical	BP
GO:0042592	homeostatic process	BP
GO:0042594	response to starvation	BP
GO:0042651	thylakoid membrane	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046467	membrane lipid biosynthetic process	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048878	chemical homeostasis	BP
GO:0050789	regulation of biological process	BP
GO:0050801	monoatomic ion homeostasis	BP
GO:0050896	response to stimulus	BP
GO:0051716	cellular response to stimulus	BP
GO:0055035	plastid thylakoid membrane	CC
GO:0055065	obsolete metal ion homeostasis	BP
GO:0055072	iron ion homeostasis	BP
GO:0055076	obsolete transition metal ion homeostasis	BP
GO:0055080	monoatomic cation homeostasis	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0080134	regulation of response to stress	BP
GO:0080177	plastoglobule organization	BP
GO:0098771	inorganic ion homeostasis	BP
GO:1901031	regulation of response to reactive oxygen species	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1902882	regulation of response to oxidative stress	BP
GO:1990641	response to iron ion starvation	BP