Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_31029.g
View in Genome Browser
Position
scaffold113312:32268-54268 (+)
22000bp
Gene Type
gene
Gene Description (Protein Product)
Ras-related protein
Organism
Pinus taeda
Also AS AT5G59840

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_44806.g Reticulon-like protein
PITA_40789.g Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family
PITA_45842.g Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family
Regulatory gene
PITA_00296.g Myb-related protein
PITA_00384.g Myb-related protein
PITA_00548.g Mini zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0002790 peptide secretion BP
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006887 exocytosis BP
GO:0006904 vesicle docking involved in exocytosis BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009306 protein secretion BP
GO:0009987 cellular process BP
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016192 vesicle-mediated transport BP
GO:0017157 regulation of exocytosis BP
GO:0022406 membrane docking BP
GO:0032879 regulation of localization BP
GO:0032940 secretion by cell BP
GO:0033036 macromolecule localization BP
GO:0042886 amide transport BP
GO:0044464 obsolete cell part CC
GO:0045184 establishment of protein localization BP
GO:0046903 secretion BP
GO:0048278 vesicle docking BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051046 regulation of secretion BP
GO:0051049 regulation of transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0060627 regulation of vesicle-mediated transport BP
GO:0065007 biological regulation BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071944 cell periphery CC
GO:0140029 exocytic process BP
GO:0140056 organelle localization by membrane tethering BP
GO:1903530 regulation of secretion by cell BP
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.