Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_32286.g
View in Genome Browser
Position
scaffold11363:105884-117037 (+)
11153bp
Gene Type
gene
Gene Description (Protein Product)
Thioredoxin domain-containing protein 9 homolog
Organism
Pinus taeda
Also AS AT2G18990

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_38797.g Sodium channel modifier 1-like
PITA_42788.g Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins
PITA_43207.g Belongs to the FPP GGPP synthase family
Regulatory gene
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_00296.g Myb-related protein
PITA_00328.g B3 DNA binding domain

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008616 queuosine biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009116 nucleoside metabolic process BP
GO:0009119 ribonucleoside metabolic process BP
GO:0009163 nucleoside biosynthetic process BP
GO:0009987 cellular process BP
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0034404 nucleobase-containing small molecule biosynthetic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0042455 ribonucleoside biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046116 queuosine metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901657 glycosyl compound metabolic process BP
GO:1901659 glycosyl compound biosynthetic process BP