Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_33056.g
View in Genome Browser
Position
scaffold111621:59789-60708 (+)
919bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the ATG8 family
Organism
Pinus taeda
Also AS AT4G21980

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_34752.g RING FYVE PHD-type zinc finger family protein
PITA_43600.g Autophagy-related protein 3
PITA_41912.g Beclin-1-like protein
Regulatory gene
PITA_00931.g Transcription factor
PITA_01500.g MADS-box transcription factor
PITA_01614.g Protein PHR1-LIKE 1-like isoform

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0006950 response to stress BP
GO:0006995 cellular response to nitrogen starvation BP
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0009267 cellular response to starvation BP
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0033554 cellular response to stress BP
GO:0042594 response to starvation BP
GO:0043562 cellular response to nitrogen levels BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0071496 cellular response to external stimulus BP