PPGR - Gene Detail

Basic Information

Gene ID	PITA_33149.g View in Genome Browser
Position	super4303:78852-330508 (-) 251656bp
Gene Type	gene
Gene Description (Protein Product)	5-AMP-activated protein
Organism	Pinus taeda
Also AS	AT5G39790

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

PITA_36884.g starch synthase 4, chloroplastic

PITA_44137.g NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor 3-like

PITA_41503.g Belongs to the glycosyltransferase 1 family. Bacterial plant glycogen synthase subfamily

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000271	polysaccharide biosynthetic process	BP
GO:0001871	obsolete pattern binding	MF
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005976	polysaccharide metabolic process	BP
GO:0005982	starch metabolic process	BP
GO:0006073	cellular glucan metabolic process	BP
GO:0006109	regulation of carbohydrate metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009250	glucan biosynthetic process	BP
GO:0009507	chloroplast	CC
GO:0009532	plastid stroma	CC
GO:0009536	plastid	CC
GO:0009569	chloroplast starch grain	CC
GO:0009570	chloroplast stroma	CC
GO:0009889	regulation of biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0010581	regulation of starch biosynthetic process	BP
GO:0010675	regulation of cellular carbohydrate metabolic process	BP
GO:0010962	regulation of glucan biosynthetic process	BP
GO:0016051	carbohydrate biosynthetic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0019252	starch biosynthetic process	BP
GO:0030246	carbohydrate binding	MF
GO:0030247	polysaccharide binding	MF
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032881	regulation of polysaccharide metabolic process	BP
GO:0032885	regulation of polysaccharide biosynthetic process	BP
GO:0033692	cellular polysaccharide biosynthetic process	BP
GO:0034637	cellular carbohydrate biosynthetic process	BP
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0043036	starch grain	CC
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043255	regulation of carbohydrate biosynthetic process	BP
GO:0044042	glucan metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044262	cellular carbohydrate metabolic process	BP
GO:0044264	cellular polysaccharide metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2000904	regulation of starch metabolic process	BP
GO:2001070	starch binding	MF