Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_33334.g
View in Genome Browser
Position
scaffold151196:80458-81667 (-)
1209bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the actin family
Organism
Pinus taeda
Also AS AT5G09810

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_46411.g Non-specific serine threonine protein kinase
PITA_39193.g Belongs to the actin-binding proteins ADF family
PITA_46034.g Belongs to the actin-binding proteins ADF family
Regulatory gene
PITA_02159.g dof zinc finger protein
PITA_02788.g dof zinc finger protein
PITA_03587.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005856 cytoskeleton CC
GO:0005858 axonemal dynein complex CC
GO:0005875 microtubule associated complex CC
GO:0005929 cilium CC
GO:0005930 axoneme CC
GO:0015630 microtubule cytoskeleton CC
GO:0030286 dynein complex CC
GO:0032838 plasma membrane bounded cell projection cytoplasm CC
GO:0032991 protein-containing complex CC
GO:0036156 inner dynein arm CC
GO:0042995 cell projection CC
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044441 obsolete ciliary part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044447 obsolete axoneme part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0097014 ciliary plasm CC
GO:0099568 cytoplasmic region CC
GO:0120025 plasma membrane bounded cell projection CC
GO:0120038 obsolete plasma membrane bounded cell projection part CC
GO:1902494 catalytic complex CC
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.