PPGR - Gene Detail

Basic Information

Gene ID	PITA_34660.g View in Genome Browser
Position	super2384:42134-90532 (-) 48398bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6 SMT family
Organism	Pinus taeda
Also AS	AT5G13710

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

PITA_49944.g 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

PITA_35316.g Delta(24)-sterol

PITA_36190.g Belongs to the sterol desaturase family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0003838	sterol 24-C-methyltransferase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005773	vacuole	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005911	cell-cell junction	CC
GO:0006629	lipid metabolic process	BP
GO:0006694	steroid biosynthetic process	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008168	methyltransferase activity	MF
GO:0008169	C-methyltransferase activity	MF
GO:0008202	steroid metabolic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	MF
GO:0009058	biosynthetic process	BP
GO:0009506	plasmodesma	CC
GO:0009790	embryo development	BP
GO:0009791	post-embryonic development	BP
GO:0009793	embryo development ending in seed dormancy	BP
GO:0010154	fruit development	BP
GO:0012505	endomembrane system	CC
GO:0016125	sterol metabolic process	BP
GO:0016126	sterol biosynthetic process	BP
GO:0016740	transferase activity	MF
GO:0016741	transferase activity, transferring one-carbon groups	MF
GO:0022414	reproductive process	BP
GO:0030054	cell junction	CC
GO:0032259	methylation	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044238	primary metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0048316	seed development	BP
GO:0048608	reproductive structure development	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0055044	symplast	CC
GO:0061458	reproductive system development	BP
GO:0071704	organic substance metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901617	organic hydroxy compound biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00100	Steroid biosynthesis	-