Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_36156.g
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Position
scaffold226027:93391-104818 (+)
11427bp
Gene Type
gene
Gene Description (Protein Product)
Protein LHY-like isoform X1
Organism
Pinus taeda
Also AS AT5G17300

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_48206.g belongs to the protein kinase superfamily
PITA_43178.g Light-mediated development protein
PITA_47118.g isoform X1
Regulatory gene
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_00226.g Belongs to the GRAS family
PITA_00328.g B3 DNA binding domain
Target gene
PITA_00018.g Plant protein of unknown function
PITA_00027.g DNA helicase
PITA_00031.g Long chain acyl-CoA synthetase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map04712 Circadian rhythm - plant -