Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_36740.g
View in Genome Browser
Position
scaffold183733:78017-78783 (-)
766bp
Gene Type
gene
Gene Description (Protein Product)
RNA-binding protein
Organism
Pinus taeda
Also AS AT3G15680

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_46801.g U11 U12 small nuclear ribonucleoprotein 35 kDa
PITA_38763.g THO complex subunit
PITA_49453.g Cyclic nucleotide-monophosphate binding domain
Regulatory gene
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_00088.g NAC domain-containing protein
PITA_00097.g NAC domain containing protein 28

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0005488 binding MF
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF