Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_41692.g
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Position
scaffold1084:188845-247123 (-)
58278bp
Gene Type
gene
Gene Description (Protein Product)
Family of unknown function (DUF5323)
Organism
Pinus taeda
Also AS AT5G17870

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_50839.g 50S ribosomal protein L27 chloroplastic
PITA_47208.g RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PITA_48260.g Belongs to the universal ribosomal protein uL11 family
Regulatory gene
PITA_02159.g dof zinc finger protein
PITA_02788.g dof zinc finger protein
PITA_03587.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC