Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_42001.g
View in Genome Browser
Position
scaffold7965:285319-375712 (+)
90393bp
Gene Type
gene
Gene Description (Protein Product)
LSD1 zinc finger
Organism
Pinus taeda
Also AS AT1G32540

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_43934.g Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), also known as PIG7, and other animal proteins.
PITA_46229.g Lysyl-tRNA synthetase
PITA_46388.g Belongs to the class-I aminoacyl-tRNA synthetase family
Regulatory gene
PITA_00047.g homeobox-leucine zipper protein
PITA_00088.g NAC domain-containing protein
PITA_00097.g NAC domain containing protein 28

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0008150 biological_process BP
GO:0010941 regulation of cell death BP
GO:0043067 regulation of programmed cell death BP
GO:0043069 negative regulation of programmed cell death BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0060548 negative regulation of cell death BP
GO:0065007 biological regulation BP