Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_42863.g
View in Genome Browser
Position
scaffold229491:141878-144954 (-)
3076bp
Gene Type
gene
Gene Description (Protein Product)
Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome
Organism
Pinus taeda
Also AS AT5G06680

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_47000.g Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome
PITA_47427.g Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome
PITA_44097.g Belongs to the cyclin family
Regulatory gene
PITA_00047.g homeobox-leucine zipper protein
PITA_01191.g Homeobox-leucine zipper protein
PITA_01500.g MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000923 equatorial microtubule organizing center CC
GO:0000930 gamma-tubulin complex CC
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005200 structural constituent of cytoskeleton MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005635 nuclear envelope CC
GO:0005737 cytoplasm CC
GO:0005815 microtubule organizing center CC
GO:0005819 spindle CC
GO:0005856 cytoskeleton CC
GO:0005874 microtubule CC
GO:0005881 cytoplasmic microtubule CC
GO:0005886 plasma membrane CC
GO:0005938 cell cortex CC
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007020 microtubule nucleation BP
GO:0007049 cell cycle BP
GO:0007051 spindle organization BP
GO:0007052 mitotic spindle organization BP
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0008275 gamma-tubulin small complex CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009624 response to nematode BP
GO:0009898 cytoplasmic side of plasma membrane CC
GO:0009987 cellular process BP
GO:0010638 positive regulation of organelle organization BP
GO:0010968 regulation of microtubule nucleation BP
GO:0012505 endomembrane system CC
GO:0015630 microtubule cytoskeleton CC
GO:0015631 tubulin binding MF
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0030863 cortical cytoskeleton CC
GO:0030981 cortical microtubule cytoskeleton CC
GO:0031109 microtubule polymerization or depolymerization BP
GO:0031110 regulation of microtubule polymerization or depolymerization BP
GO:0031112 positive regulation of microtubule polymerization or depolymerization BP
GO:0031113 regulation of microtubule polymerization BP
GO:0031116 positive regulation of microtubule polymerization BP
GO:0031122 cytoplasmic microtubule organization BP
GO:0031334 positive regulation of protein-containing complex assembly BP
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032153 cell division site CC
GO:0032155 obsolete cell division site part CC
GO:0032271 regulation of protein polymerization BP
GO:0032273 positive regulation of protein polymerization BP
GO:0032886 regulation of microtubule-based process BP
GO:0032991 protein-containing complex CC
GO:0033043 regulation of organelle organization BP
GO:0034622 protein-containing complex assembly BP
GO:0043015 gamma-tubulin binding MF
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043254 regulation of protein-containing complex assembly BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044087 regulation of cellular component biogenesis BP
GO:0044089 positive regulation of cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044428 obsolete nuclear part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044448 obsolete cell cortex part CC
GO:0044450 obsolete microtubule organizing center part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0046785 microtubule polymerization BP
GO:0048285 organelle fission BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051128 regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051225 spindle assembly BP
GO:0051258 protein polymerization BP
GO:0051321 meiotic cell cycle BP
GO:0051415 microtubule nucleation by interphase microtubule organizing center BP
GO:0051418 microtubule nucleation by microtubule organizing center BP
GO:0051493 regulation of cytoskeleton organization BP
GO:0051495 positive regulation of cytoskeleton organization BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0055028 cortical microtubule CC
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0070507 regulation of microtubule cytoskeleton organization BP
GO:0070925 organelle assembly BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0090063 positive regulation of microtubule nucleation BP
GO:0090307 mitotic spindle assembly BP
GO:0097435 supramolecular fiber organization BP
GO:0098552 side of membrane CC
GO:0098562 cytoplasmic side of membrane CC
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0099568 cytoplasmic region CC
GO:0140014 mitotic nuclear division BP
GO:1902850 microtubule cytoskeleton organization involved in mitosis BP
GO:1902903 regulation of supramolecular fiber organization BP
GO:1902905 positive regulation of supramolecular fiber organization BP
GO:1903047 mitotic cell cycle process BP