Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_43884.g
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Position
scaffold153238:137243-185019 (-)
47776bp
Gene Type
gene
Gene Description (Protein Product)
5-formyltetrahydrofolate cyclo-ligase-like protein COG0212
Organism
Pinus taeda
Also AS AT1G76730

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_48400.g phosphoribosylglycinamide formyltransferase
PITA_44180.g 5-formyltetrahydrofolate cyclo-ligase
PITA_47052.g 5-formyltetrahydrofolate cyclo-ligase
Regulatory gene
PITA_42699.g bpc6, bbr bpc6, atbpc6 atbpc6

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006403 RNA localization BP
GO:0008150 biological_process BP
GO:0008298 intracellular mRNA localization BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0033036 macromolecule localization BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0051179 localization BP
GO:0051641 cellular localization BP
GO:0070727 cellular macromolecule localization BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00670 One carbon pool by folate -