Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_44434.g
View in Genome Browser
Position
scaffold187118:237058-237882 (+)
824bp
Gene Type
gene
Gene Description (Protein Product)
Nuclear transcription factor Y subunit
Organism
Pinus taeda
Also AS AT3G48590

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_45130.g DNA polymerase epsilon subunit
PITA_48879.g Zinc finger protein CONSTANS-like
PITA_51648.g Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
Regulatory gene
PITA_01973.g GATA transcription factor
PITA_02159.g dof zinc finger protein
PITA_02701.g GATA transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0008150 biological_process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048519 negative regulation of biological process BP
GO:0048579 negative regulation of long-day photoperiodism, flowering BP
GO:0048580 regulation of post-embryonic development BP
GO:0048581 negative regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0048586 regulation of long-day photoperiodism, flowering BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0051093 negative regulation of developmental process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051241 negative regulation of multicellular organismal process BP
GO:0065007 biological regulation BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000028 regulation of photoperiodism, flowering BP
GO:2000241 regulation of reproductive process BP
GO:2000242 negative regulation of reproductive process BP