Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_44805.g
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Position
scaffold47020:191231-200448 (-)
9217bp
Gene Type
gene
Gene Description (Protein Product)
RNA recognition motif
Organism
Pinus taeda
Also AS AT3G20930

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_49654.g Overexpressor of cationic peroxidase 3
PITA_47368.g RNA-binding CRS1 YhbY (CRM) domain protein
PITA_44990.g CRS2-associated factor 2
Regulatory gene
PITA_00088.g NAC domain-containing protein
PITA_00097.g NAC domain containing protein 28
PITA_00262.g NAC transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0005488 binding MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009451 RNA modification BP
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0016070 RNA metabolic process BP
GO:0016071 mRNA metabolic process BP
GO:0016553 base conversion or substitution editing BP
GO:0016554 cytidine to uridine editing BP
GO:0016556 mRNA modification BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0050896 response to stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:1900865 chloroplast RNA modification BP
GO:1900871 chloroplast mRNA modification BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF