Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_45966.g
View in Genome Browser
Position
scaffold104229:92363-93129 (-)
766bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the plant LTP family
Organism
Pinus taeda
Also AS AT3G22600

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_46878.g FabA-like domain
PITA_47657.g 3-oxoacyl- acyl-carrier-protein reductase
PITA_50705.g Possibly involved in carbohydrate binding
Regulatory gene
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_00088.g NAC domain-containing protein
PITA_00097.g NAC domain containing protein 28

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0016020 membrane CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031225 obsolete anchored component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0044425 obsolete membrane part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0046658 obsolete anchored component of plasma membrane CC
GO:0071944 cell periphery CC