Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_46277.g
View in Genome Browser
Position
super1772:161319-220568 (-)
59249bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase
Organism
Pinus taeda
Also AS AT3G55140

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_48834.g Acts in the modification of cell walls via demethylesterification of cell wall pectin
PITA_50742.g Acts in the modification of cell walls via demethylesterification of cell wall pectin
PITA_46768.g glycoside hydrolase family 28 protein polygalacturonase (pectinase) family protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -