Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_46526.g
View in Genome Browser
Position
scaffold226929:39703-40376 (-)
673bp
Gene Type
gene
Gene Description (Protein Product)
AP-4 complex subunit
Organism
Pinus taeda
Also AS AT1G31730

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_50845.g Ubiquitin-2 like Rad60 SUMO-like
PITA_48935.g ubiquitin-60S ribosomal protein
PITA_49181.g ubiquitin-NEDD8-like protein
Regulatory gene
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_00322.g WRKY transcription factor
PITA_00328.g B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005911 cell-cell junction CC
GO:0009506 plasmodesma CC
GO:0016020 membrane CC
GO:0030054 cell junction CC
GO:0030117 membrane coat CC
GO:0030119 AP-type membrane coat adaptor complex CC
GO:0030124 AP-4 adaptor complex CC
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048475 coated membrane CC
GO:0055044 symplast CC
GO:0098796 membrane protein complex CC