Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_48374.g
View in Genome Browser
Position
scaffold219186:17784-31826 (+)
14042bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the glycosyl hydrolase 1 family
Organism
Pinus taeda
Also AS AT5G24540

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
PITA_00010.g Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
PITA_00047.g homeobox-leucine zipper protein
PITA_00322.g WRKY transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000016 lactase activity MF
GO:0001666 response to hypoxia BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004338 glucan exo-1,3-beta-glucosidase activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0004565 beta-galactosidase activity MF
GO:0004567 beta-mannosidase activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0005887 plasma membrane CC
GO:0005903 brush border CC
GO:0006950 response to stress BP
GO:0007584 response to nutrient BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008422 beta-glucosidase activity MF
GO:0009605 response to external stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009636 response to toxic substance BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009743 response to carbohydrate BP
GO:0009744 response to sucrose BP
GO:0009991 response to extracellular stimulus BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010039 response to iron ion BP
GO:0010040 response to iron(II) ion BP
GO:0010045 response to nickel cation BP
GO:0010288 response to lead ion BP
GO:0015923 mannosidase activity MF
GO:0015925 galactosidase activity MF
GO:0015926 glucosidase activity MF
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016324 apical plasma membrane CC
GO:0016740 transferase activity MF
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0031667 response to nutrient levels BP
GO:0033907 beta-D-fucosidase activity MF
GO:0034285 response to disaccharide BP
GO:0036293 response to decreased oxygen levels BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042594 response to starvation BP
GO:0043627 response to estrogen BP
GO:0044425 obsolete membrane part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0045177 apical part of cell CC
GO:0045471 response to ethanol BP
GO:0046677 response to antibiotic BP
GO:0047701 beta-L-arabinosidase activity MF
GO:0050896 response to stimulus BP
GO:0070482 response to oxygen levels BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:0080079 cellobiose glucosidase activity MF
GO:0080083 beta-gentiobiose beta-glucosidase activity MF
GO:0097305 response to alcohol BP
GO:0098590 plasma membrane region CC
GO:0098862 cluster of actin-based cell projections CC
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901657 glycosyl compound metabolic process BP
GO:1901700 response to oxygen-containing compound BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00500 Starch and sucrose metabolism -
map00500 Starch and sucrose metabolism -
map00460 Cyanoamino acid metabolism -
map00460 Cyanoamino acid metabolism -