Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_48638.g
View in Genome Browser
Position
scaffold51661:165771-182094 (+)
16323bp
Gene Type
gene
Gene Description (Protein Product)
F-Box protein
Organism
Pinus taeda
Also AS AT3G58530

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_48687.g isoaspartyl peptidase L-asparaginase
PITA_48743.g Phenylalanine--tRNA ligase beta subunit
PITA_50948.g Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Regulatory gene
PITA_00088.g NAC domain-containing protein
PITA_00097.g NAC domain containing protein 28
PITA_00262.g NAC transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00460 Cyanoamino acid metabolism -
map00250 Alanine, aspartate and glutamate metabolism -