PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	PITA_48977.g View in Genome Browser
Position	super84:280561-288913 (-) 8352bp
Gene Type	gene
Gene Description (Protein Product)	Programmed cell death
Organism	Pinus taeda
Also AS	AT1G29850

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

PITA_51001.g prefoldin subunit 5

PITA_50160.g Belongs to the universal ribosomal protein uS4 family

PITA_49542.g -

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005539	glycosaminoglycan binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006915	apoptotic process	BP
GO:0008047	enzyme activator activity	MF
GO:0008092	cytoskeletal protein binding	MF
GO:0008150	biological_process	BP
GO:0008201	heparin binding	MF
GO:0008219	cell death	BP
GO:0008285	negative regulation of cell population proliferation	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009893	positive regulation of metabolic process	BP
GO:0009966	regulation of signal transduction	BP
GO:0009967	positive regulation of signal transduction	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010468	regulation of gene expression	BP
GO:0010604	positive regulation of macromolecule metabolic process	BP
GO:0010628	positive regulation of gene expression	BP
GO:0010638	positive regulation of organelle organization	BP
GO:0010646	regulation of cell communication	BP
GO:0010647	positive regulation of cell communication	BP
GO:0010698	acetyltransferase activator activity	MF
GO:0010821	regulation of mitochondrion organization	BP
GO:0010822	positive regulation of mitochondrion organization	BP
GO:0010941	regulation of cell death	BP
GO:0010942	positive regulation of cell death	BP
GO:0010950	positive regulation of endopeptidase activity	BP
GO:0010952	positive regulation of peptidase activity	BP
GO:0012501	programmed cell death	BP
GO:0015631	tubulin binding	MF
GO:0019222	regulation of metabolic process	BP
GO:0023051	regulation of signaling	BP
GO:0023056	positive regulation of signaling	BP
GO:0030162	regulation of proteolysis	BP
GO:0030234	enzyme regulator activity	MF
GO:0031323	regulation of cellular metabolic process	BP
GO:0031325	positive regulation of cellular metabolic process	BP
GO:0032268	regulation of protein metabolic process	BP
GO:0032270	positive regulation of protein metabolic process	BP
GO:0032386	regulation of intracellular transport	BP
GO:0032388	positive regulation of intracellular transport	BP
GO:0032879	regulation of localization	BP
GO:0032880	regulation of protein localization	BP
GO:0033043	regulation of organelle organization	BP
GO:0033157	regulation of intracellular protein transport	BP
GO:0042127	regulation of cell population proliferation	BP
GO:0042221	response to chemical	BP
GO:0042981	regulation of apoptotic process	BP
GO:0043065	positive regulation of apoptotic process	BP
GO:0043067	regulation of programmed cell death	BP
GO:0043068	positive regulation of programmed cell death	BP
GO:0043085	positive regulation of catalytic activity	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043280	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	BP
GO:0043281	regulation of cysteine-type endopeptidase activity involved in apoptotic process	BP
GO:0044093	positive regulation of molecular function	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045862	positive regulation of proteolysis	BP
GO:0048487	beta-tubulin binding	MF
GO:0048518	positive regulation of biological process	BP
GO:0048519	negative regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048584	positive regulation of response to stimulus	BP
GO:0050789	regulation of biological process	BP
GO:0050790	regulation of catalytic activity	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051049	regulation of transport	BP
GO:0051050	positive regulation of transport	BP
GO:0051128	regulation of cellular component organization	BP
GO:0051130	positive regulation of cellular component organization	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051173	positive regulation of nitrogen compound metabolic process	BP
GO:0051222	positive regulation of protein transport	BP
GO:0051223	regulation of protein transport	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0051247	positive regulation of protein metabolic process	BP
GO:0051336	regulation of hydrolase activity	BP
GO:0051345	positive regulation of hydrolase activity	BP
GO:0051716	cellular response to stimulus	BP
GO:0052547	regulation of peptidase activity	BP
GO:0052548	regulation of endopeptidase activity	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0060341	regulation of cellular localization	BP
GO:0065007	biological regulation	BP
GO:0065009	regulation of molecular function	BP
GO:0070201	regulation of establishment of protein localization	BP
GO:0070848	response to growth factor	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071310	cellular response to organic substance	BP
GO:0071363	cellular response to growth factor stimulus	BP
GO:0071495	cellular response to endogenous stimulus	BP
GO:0071559	response to transforming growth factor beta	BP
GO:0071560	cellular response to transforming growth factor beta stimulus	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090087	regulation of peptide transport	BP
GO:0090199	regulation of release of cytochrome c from mitochondria	BP
GO:0090200	positive regulation of release of cytochrome c from mitochondria	BP
GO:0090316	positive regulation of intracellular protein transport	BP
GO:0097367	carbohydrate derivative binding	MF
GO:0098772	molecular function regulator activity	MF
GO:1901681	sulfur compound binding	MF
GO:1903214	regulation of protein targeting to mitochondrion	BP
GO:1903332	regulation of protein folding	BP
GO:1903333	negative regulation of protein folding	BP
GO:1903533	regulation of protein targeting	BP
GO:1903636	regulation of protein insertion into mitochondrial outer membrane	BP
GO:1903638	positive regulation of protein insertion into mitochondrial outer membrane	BP
GO:1903644	regulation of chaperone-mediated protein folding	BP
GO:1903645	negative regulation of chaperone-mediated protein folding	BP
GO:1903747	regulation of establishment of protein localization to mitochondrion	BP
GO:1903749	positive regulation of establishment of protein localization to mitochondrion	BP
GO:1903827	regulation of protein localization	BP
GO:1903829	positive regulation of protein localization	BP
GO:1903955	positive regulation of protein targeting to mitochondrion	BP
GO:1904589	regulation of protein import	BP
GO:1904591	positive regulation of protein import	BP
GO:1904951	positive regulation of establishment of protein localization	BP
GO:1905475	regulation of protein localization to membrane	BP
GO:1905477	positive regulation of protein localization to membrane	BP
GO:2000116	regulation of cysteine-type endopeptidase activity	BP
GO:2001056	positive regulation of cysteine-type endopeptidase activity	BP
GO:2001233	regulation of apoptotic signaling pathway	BP
GO:2001235	positive regulation of apoptotic signaling pathway	BP