Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_48981.g
View in Genome Browser
Position
scaffold31927:258328-262134 (+)
3806bp
Gene Type
gene
Gene Description (Protein Product)
Ninja-family protein
Organism
Pinus taeda
Also AS AT3G29575

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_49685.g Topless-related protein
PITA_49329.g NAC domain-containing protein
PITA_50593.g mitogen-activated protein kinase
Regulatory gene
PITA_01161.g transcription factor
PITA_02206.g Transcription factor
PITA_02816.g helix loop helix domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006109 regulation of carbohydrate metabolic process BP
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0008150 biological_process BP
GO:0009628 response to abiotic stimulus BP
GO:0009651 response to salt stress BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009787 regulation of abscisic acid-activated signaling pathway BP
GO:0009788 negative regulation of abscisic acid-activated signaling pathway BP
GO:0009889 regulation of biosynthetic process BP
GO:0009966 regulation of signal transduction BP
GO:0009968 negative regulation of signal transduction BP
GO:0010033 response to organic substance BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010581 regulation of starch biosynthetic process BP
GO:0010646 regulation of cell communication BP
GO:0010648 negative regulation of cell communication BP
GO:0010675 regulation of cellular carbohydrate metabolic process BP
GO:0010962 regulation of glucan biosynthetic process BP
GO:0019222 regulation of metabolic process BP
GO:0023051 regulation of signaling BP
GO:0023057 negative regulation of signaling BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032881 regulation of polysaccharide metabolic process BP
GO:0032885 regulation of polysaccharide biosynthetic process BP
GO:0033993 response to lipid BP
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043255 regulation of carbohydrate biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0097305 response to alcohol BP
GO:1901419 regulation of response to alcohol BP
GO:1901420 negative regulation of response to alcohol BP
GO:1901700 response to oxygen-containing compound BP
GO:1905957 regulation of cellular response to alcohol BP
GO:1905958 negative regulation of cellular response to alcohol BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000904 regulation of starch metabolic process BP