Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
PITA_51420.g
View in Genome Browser
Position
scaffold106293:187415-255346 (-)
67931bp
Gene Type
gene
Gene Description (Protein Product)
Lil3 protein
Organism
Pinus taeda
Also AS AT4G17600

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
PITA_51661.g CDGSH iron-sulfur domain-containing protein
PITA_51616.g Inositol monophosphatase family
Regulatory gene
PITA_00548.g Mini zinc finger protein
PITA_10243.g tesmin TSO1-like CXC
PITA_13341.g Zinc-finger homeodomain protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006810 transport BP
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0010380 regulation of chlorophyll biosynthetic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0016020 membrane CC
GO:0019216 regulation of lipid metabolic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019747 regulation of isoprenoid metabolic process BP
GO:0019899 enzyme binding MF
GO:0030656 regulation of vitamin metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031328 positive regulation of cellular biosynthetic process BP
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0034357 photosynthetic membrane CC
GO:0042651 thylakoid membrane CC
GO:0042802 identical protein binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043495 protein-membrane adaptor activity MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045828 positive regulation of isoprenoid metabolic process BP
GO:0045834 positive regulation of lipid metabolic process BP
GO:0046136 positive regulation of vitamin metabolic process BP
GO:0046889 positive regulation of lipid biosynthetic process BP
GO:0046890 regulation of lipid biosynthetic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051179 localization BP
GO:0051193 obsolete regulation of cofactor metabolic process BP
GO:0051194 obsolete positive regulation of cofactor metabolic process BP
GO:0051234 establishment of localization BP
GO:0051252 regulation of RNA metabolic process BP
GO:0055035 plastid thylakoid membrane CC
GO:0055085 transmembrane transport BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0062013 positive regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0090056 regulation of chlorophyll metabolic process BP
GO:0140110 transcription regulator activity MF
GO:1901401 regulation of tetrapyrrole metabolic process BP
GO:1901403 positive regulation of tetrapyrrole metabolic process BP
GO:1901463 regulation of tetrapyrrole biosynthetic process BP
GO:1901465 positive regulation of tetrapyrrole biosynthetic process BP
GO:1902326 positive regulation of chlorophyll biosynthetic process BP
GO:1902930 regulation of alcohol biosynthetic process BP
GO:1902932 positive regulation of alcohol biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1904963 regulation of phytol biosynthetic process BP
GO:1904964 positive regulation of phytol biosynthetic process BP
GO:1904965 regulation of vitamin E biosynthetic process BP
GO:1904966 positive regulation of vitamin E biosynthetic process BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP