Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118027656
View in Genome Browser
Position
NW_023271847.1:934914-939524 (-)
4610bp
Gene Type
gene
Gene Description (Protein Product)
Cysteine desulfurase 2
Organism
Populus alba
Also AS Potri.009G066000AT1G08490Potri.009G066000.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118049009 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
gene-LOC118040724 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
gene-LOC118053165 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
Regulatory gene
gene-LOC118027806 Cyclic dof factor
gene-LOC118027982 B3 DNA binding domain
gene-LOC118027984 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001887 selenium compound metabolic process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006464 protein modification process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009000 selenocysteine lyase activity MF
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0010269 response to selenium ion BP
GO:0016043 cellular component organization BP
GO:0016226 iron-sulfur cluster assembly BP
GO:0016740 transferase activity MF
GO:0016782 transferase activity, transferring sulphur-containing groups MF
GO:0016783 sulfurtransferase activity MF
GO:0016829 lyase activity MF
GO:0016846 carbon-sulfur lyase activity MF
GO:0018282 metal incorporation into metallo-sulfur cluster BP
GO:0018283 iron incorporation into metallo-sulfur cluster BP
GO:0019538 protein metabolic process BP
GO:0022607 cellular component assembly BP
GO:0031071 cysteine desulfurase activity MF
GO:0031163 metallo-sulfur cluster assembly BP
GO:0036211 protein modification process BP
GO:0042221 response to chemical BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:1901564 organonitrogen compound metabolic process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00450 Selenocompound metabolism -