Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118028541
View in Genome Browser
Position
NW_023271866.1:1041758-1049077 (+)
7319bp
Gene Type
gene
Gene Description (Protein Product)
Agamous-like MADS-box protein
K-box region
Organism
Populus alba
Also AS Potri.003G119700AT4G22950Potri.003G119700.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118041260 MADS-box protein
gene-LOC118056622 Agamous-like MADS-box protein
gene-LOC118042296 MADS-box protein
Regulatory gene
gene-LOC118027806 Cyclic dof factor
gene-LOC118027869 Homeodomain
gene-LOC118028055 Dof zinc finger protein
Target gene
gene-E2229_mgp01 Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity)
gene-E2229_mgp02 structural constituent of ribosome
gene-E2229_mgp06 ATP synthase subunit C

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0001067 transcription regulatory region nucleic acid binding MF
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006950 response to stress BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009628 response to abiotic stimulus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009888 tissue development BP
GO:0009889 regulation of biosynthetic process BP
GO:0010015 root morphogenesis BP
GO:0010048 vernalization response BP
GO:0010073 meristem maintenance BP
GO:0010074 maintenance of meristem identity BP
GO:0010075 regulation of meristem growth BP
GO:0010076 maintenance of floral meristem identity BP
GO:0010082 regulation of root meristem growth BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010817 regulation of hormone levels BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019827 stem cell population maintenance BP
GO:0022414 reproductive process BP
GO:0022622 root system development BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032879 regulation of localization BP
GO:0040008 regulation of growth BP
GO:0040034 regulation of development, heterochronic BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044212 transcription cis-regulatory region binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048364 root development BP
GO:0048506 regulation of timing of meristematic phase transition BP
GO:0048507 meristem development BP
GO:0048509 regulation of meristem development BP
GO:0048510 regulation of timing of transition from vegetative to reproductive phase BP
GO:0048608 reproductive structure development BP
GO:0048638 regulation of developmental growth BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051049 regulation of transport BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0098727 maintenance of cell number BP
GO:0099402 plant organ development BP
GO:0140110 transcription regulator activity MF
GO:1901363 heterocyclic compound binding MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905392 plant organ morphogenesis BP
GO:2000012 regulation of auxin polar transport BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000280 regulation of root development BP
GO:2001141 regulation of RNA biosynthetic process BP