Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118041059
View in Genome Browser
Position
NW_023271198.1:2435725-2444551 (-)
8826bp
Gene Type
gene
Gene Description (Protein Product)
Vacuolar protein sorting-associated protein 51 homolog
Organism
Populus alba
Also AS Potri.014G120900AT4G02030Potri.014G120900.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118052966 Vacuolar protein sorting-associated protein 52
gene-LOC118046261 May act as a component of the auxin efflux carrier
gene-LOC118050932 May act as a component of the auxin efflux carrier
Regulatory gene
gene-LOC118027806 Cyclic dof factor
gene-LOC118027869 Homeodomain
gene-LOC118027982 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000938 GARP complex CC
GO:0003002 regionalization BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005794 Golgi apparatus CC
GO:0006810 transport BP
GO:0006914 autophagy BP
GO:0007034 vacuolar transport BP
GO:0007041 lysosomal transport BP
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009987 cellular process BP
GO:0010051 xylem and phloem pattern formation BP
GO:0010305 leaf vascular tissue pattern formation BP
GO:0012505 endomembrane system CC
GO:0016192 vesicle-mediated transport BP
GO:0016197 endosomal transport BP
GO:0016482 cytosolic transport BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032456 endocytic recycling BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0042147 retrograde transport, endosome to Golgi BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0048856 anatomical structure development BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0055037 recycling endosome CC
GO:0061919 process utilizing autophagic mechanism BP
GO:0097708 intracellular vesicle CC
GO:0099023 vesicle tethering complex CC
GO:1990745 EARP complex CC