Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118050682
View in Genome Browser
Position
NW_023271460.1:75355-84180 (+)
8825bp
Gene Type
gene
Gene Description (Protein Product)
Sirohydrochlorin
Organism
Populus alba
Also AS Potri.001G178800AT1G50170Potri.001G178800.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118050804 Ferredoxin-nitrite reductase
gene-LOC118054115 Belongs to the 'GDSL' lipolytic enzyme family
gene-LOC118054117 Belongs to the 'GDSL' lipolytic enzyme family
Regulatory gene
gene-LOC118027806 Cyclic dof factor
gene-LOC118028055 Dof zinc finger protein
gene-LOC118028114 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004325 ferrochelatase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006778 porphyrin-containing compound metabolic process BP
GO:0006779 porphyrin-containing compound biosynthetic process BP
GO:0006783 heme biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009987 cellular process BP
GO:0016829 lyase activity MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019354 siroheme biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0033013 tetrapyrrole metabolic process BP
GO:0033014 tetrapyrrole biosynthetic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042168 heme metabolic process BP
GO:0042440 pigment metabolic process BP
GO:0042802 identical protein binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046148 pigment biosynthetic process BP
GO:0046156 siroheme metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0048037 obsolete cofactor binding MF
GO:0050896 response to stimulus BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051188 obsolete cofactor biosynthetic process BP
GO:0051266 sirohydrochlorin ferrochelatase activity MF
GO:0051536 iron-sulfur cluster binding MF
GO:0051540 metal cluster binding MF
GO:0071704 organic substance metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00860 Porphyrin and chlorophyll metabolism -