Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118053147
View in Genome Browser
Position
NW_023271516.1:2826956-2829961 (-)
3005bp
Gene Type
gene
Gene Description (Protein Product)
Polygalacturonase-like
Organism
Populus alba
Also AS Potri.006G052700AT3G57510Potri.006G052700.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118056781 Pectinesterase
gene-LOC118056325 Pectinesterase
gene-LOC118060611 Pectinesterase
Regulatory gene
gene-LOC118027467 NAC domain-containing protein
gene-LOC118027528 NAC domain-containing protein
gene-LOC118027806 Cyclic dof factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0004650 polygalacturonase activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009664 plant-type cell wall organization BP
GO:0009791 post-embryonic development BP
GO:0009827 plant-type cell wall modification BP
GO:0009830 cell wall modification involved in abscission BP
GO:0009838 abscission BP
GO:0009900 dehiscence BP
GO:0009901 anther dehiscence BP
GO:0009908 flower development BP
GO:0009987 cellular process BP
GO:0010047 fruit dehiscence BP
GO:0010227 floral organ abscission BP
GO:0016043 cellular component organization BP
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0022411 cellular component disassembly BP
GO:0022414 reproductive process BP
GO:0030312 external encapsulating structure CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0042545 cell wall modification BP
GO:0044277 cell wall disassembly BP
GO:0044464 obsolete cell part CC
GO:0045229 external encapsulating structure organization BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048438 floral whorl development BP
GO:0048443 stamen development BP
GO:0048466 androecium development BP
GO:0048608 reproductive structure development BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048653 anther development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0061458 reproductive system development BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071669 plant-type cell wall organization or biogenesis BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0090567 reproductive shoot system development BP
GO:0099402 plant organ development BP
KEGG Term Name Description
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -
map00040 Pentose and glucuronate interconversions -