Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118054486
View in Genome Browser
Position
NW_023271554.1:1255319-1262261 (+)
6942bp
Gene Type
gene
Gene Description (Protein Product)
Agamous-like MADS-box protein AGL9 homolog
Organism
Populus alba
Also AS Potri.003G169600AT1G24260Potri.003G169600.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118056896 Serine acetyltransferase
gene-LOC118057778 Belongs to the cysteine synthase cystathionine beta- synthase family
gene-LOC118060635 The H protein shuttles the methylamine group of glycine from the P protein to the T protein
Regulatory gene
gene-LOC118027635 Heat stress transcription factor
gene-LOC118027806 Cyclic dof factor
gene-LOC118028026 Telomere repeat-binding protein
Target gene
gene-E2229_mgp01 Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity)
gene-E2229_mgp02 structural constituent of ribosome
gene-E2229_mgp06 ATP synthase subunit C

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC