Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118055744
View in Genome Browser
Position
NW_023271583.1:107904-113342 (+)
5438bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
Organism
Populus alba
Also AS Potri.008G083900AT1G16300Potri.008G083900.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118063117 fructose-bisphosphate aldolase
gene-LOC118058968 fructose-bisphosphate aldolase
gene-LOC118057607 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
Regulatory gene
gene-LOC118027806 Cyclic dof factor
gene-LOC118027982 B3 DNA binding domain
gene-LOC118027984 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity MF
GO:0005488 binding MF
GO:0005507 copper ion binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005975 carbohydrate metabolic process BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008270 zinc ion binding MF
GO:0009536 plastid CC
GO:0009555 pollen development BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009735 response to cytokinin BP
GO:0009791 post-embryonic development BP
GO:0009908 flower development BP
GO:0010033 response to organic substance BP
GO:0016020 membrane CC
GO:0016491 oxidoreductase activity MF
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor MF
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors MF
GO:0022414 reproductive process BP
GO:0022622 root system development BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0042221 response to chemical BP
GO:0042592 homeostatic process BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity MF
GO:0044238 primary metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048229 gametophyte development BP
GO:0048364 root development BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048438 floral whorl development BP
GO:0048443 stamen development BP
GO:0048466 androecium development BP
GO:0048608 reproductive structure development BP
GO:0048653 anther development BP
GO:0048658 anther wall tapetum development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0048878 chemical homeostasis BP
GO:0050801 monoatomic ion homeostasis BP
GO:0050896 response to stimulus BP
GO:0055081 monoatomic anion homeostasis BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:0080022 primary root development BP
GO:0080144 intracellular amino acid homeostasis BP
GO:0090567 reproductive shoot system development BP
GO:0099402 plant organ development BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00710 Carbon fixation in photosynthetic organisms -
map00010 Glycolysis / Gluconeogenesis Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which often corresponds to operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].