Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118057296
View in Genome Browser
Position
NW_023271618.1:822992-834624 (+)
11632bp
Gene Type
gene
Gene Description (Protein Product)
glutamate synthase
Organism
Populus alba
Also AS Potri.015G017500AT5G53460Potri.015G017500.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118062461 ATP-citrate synthase beta chain protein
gene-LOC118063178 lactate/malate dehydrogenase, alpha/beta C-terminal domain
gene-LOC118060635 The H protein shuttles the methylamine group of glycine from the P protein to the T protein
Regulatory gene
gene-LOC118027806 Cyclic dof factor
gene-LOC118027982 B3 DNA binding domain
gene-LOC118027984 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006536 glutamate metabolic process BP
GO:0006537 glutamate biosynthetic process BP
GO:0006541 glutamine metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008652 amino acid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009064 glutamine family amino acid metabolic process BP
GO:0009084 glutamine family amino acid biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009735 response to cytokinin BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0015930 glutamate synthase activity MF
GO:0016040 glutamate synthase (NADH) activity MF
GO:0016053 organic acid biosynthetic process BP
GO:0016491 oxidoreductase activity MF
GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors MF
GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor MF
GO:0019676 ammonia assimilation cycle BP
GO:0019740 nitrogen utilization BP
GO:0019752 carboxylic acid metabolic process BP
GO:0032502 developmental process BP
GO:0040007 growth BP
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0043648 dicarboxylic acid metabolic process BP
GO:0043650 dicarboxylic acid biosynthetic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045181 glutamate synthase activity, NAD(P)H as acceptor MF
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046686 response to cadmium ion BP
GO:0048589 developmental growth BP
GO:0050896 response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0060359 response to ammonium ion BP
GO:0071704 organic substance metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
GO:1901698 response to nitrogen compound BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00910 Nitrogen metabolism -
map00250 Alanine, aspartate and glutamate metabolism -