Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118057638
View in Genome Browser
Position
NW_023271622.1:1116755-1118804 (+)
2049bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase
Organism
Populus alba
Also AS Potri.015G087800AT5G63180Potri.015G087800.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118060588 Glycosyl hydrolases family 28
gene-LOC118060611 Pectinesterase
gene-LOC118061015 Acts in the modification of cell walls via demethylesterification of cell wall pectin
Regulatory gene
gene-LOC118027806 Cyclic dof factor
gene-LOC118027869 Homeodomain
gene-LOC118027982 B3 DNA binding domain

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -