PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	gene-LOC118057673 View in Genome Browser
Position	NW_023271623.1:73996-79296 (-) 5300bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the beta-ketoacyl-ACP synthases family
Organism	Populus alba
Also AS	Potri.002G219500AT2G04540Potri.002G219500.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-LOC118062598 2-oxoisovalerate dehydrogenase subunit beta gene-LOC118057917 Plays an essential role in chain termination during de novo fatty acid synthesis gene-LOC118061924 Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide
Regulatory gene	gene-LOC118027806 Cyclic dof factor gene-LOC118027982 B3 DNA binding domain gene-LOC118027984 B3 DNA binding domain

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0006996	organelle organization	BP
GO:0008150	biological_process	BP
GO:0009657	plastid organization	BP
GO:0009668	plastid membrane organization	BP
GO:0009987	cellular process	BP
GO:0010027	thylakoid membrane organization	BP
GO:0016043	cellular component organization	BP
GO:0061024	membrane organization	BP
GO:0071840	cellular component organization or biogenesis	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00780	Biotin metabolism	-
map00061	Fatty acid biosynthesis	-