Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118058140
View in Genome Browser
Position
NW_023271661.1:362056-364170 (+)
2114bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase
Organism
Populus alba
Also AS Potri.001G339500AT3G27400Potri.001G339500.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118060588 Glycosyl hydrolases family 28
gene-LOC118060973 Acts in the modification of cell walls via demethylesterification of cell wall pectin
gene-LOC118060612 Acts in the modification of cell walls via demethylesterification of cell wall pectin
Regulatory gene
gene-LOC118027693 transcription factor
gene-LOC118027738 Myb-related protein
gene-LOC118027779 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009624 response to nematode BP
GO:0043207 response to external biotic stimulus BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -