Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118058735
View in Genome Browser
Position
NW_023271713.1:1704867-1714631 (-)
9764bp
Gene Type
gene
Gene Description (Protein Product)
Phospholipase A-2-activating
Organism
Populus alba
Also AS Potri.T125104AT3G18860Potri.T125104.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118059530 Ubiquitin family
gene-LOC118062990 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
gene-LOC118061781 Ubiquitin-2 like Rad60 SUMO-like
Regulatory gene
gene-LOC118027565 Myb-like DNA-binding domain
gene-LOC118027806 Cyclic dof factor
gene-LOC118027840 transcription

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001558 regulation of cell growth BP
GO:0002237 response to molecule of bacterial origin BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006082 organic acid metabolic process BP
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006631 fatty acid metabolic process BP
GO:0006690 icosanoid metabolic process BP
GO:0006692 prostanoid metabolic process BP
GO:0006693 prostaglandin metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006914 autophagy BP
GO:0007275 multicellular organism development BP
GO:0007399 nervous system development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009892 negative regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010517 regulation of phospholipase activity BP
GO:0010518 positive regulation of phospholipase activity BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010720 positive regulation of cell development BP
GO:0010975 regulation of neuron projection development BP
GO:0010976 positive regulation of neuron projection development BP
GO:0016236 macroautophagy BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0019941 modification-dependent protein catabolic process BP
GO:0022008 neurogenesis BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022604 regulation of cell morphogenesis BP
GO:0030154 cell differentiation BP
GO:0030163 protein catabolic process BP
GO:0030307 positive regulation of cell growth BP
GO:0030334 regulation of cell migration BP
GO:0030335 positive regulation of cell migration BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031344 regulation of cell projection organization BP
GO:0031346 positive regulation of cell projection organization BP
GO:0031396 regulation of protein ubiquitination BP
GO:0031397 negative regulation of protein ubiquitination BP
GO:0031399 regulation of protein modification process BP
GO:0031400 negative regulation of protein modification process BP
GO:0032268 regulation of protein metabolic process BP
GO:0032269 negative regulation of protein metabolic process BP
GO:0032429 regulation of phospholipase A2 activity BP
GO:0032430 positive regulation of phospholipase A2 activity BP
GO:0032496 response to lipopolysaccharide BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0032879 regulation of localization BP
GO:0033559 unsaturated fatty acid metabolic process BP
GO:0033993 response to lipid BP
GO:0040008 regulation of growth BP
GO:0040012 regulation of locomotion BP
GO:0040017 positive regulation of locomotion BP
GO:0042221 response to chemical BP
GO:0043085 positive regulation of catalytic activity BP
GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044093 positive regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045202 synapse CC
GO:0045595 regulation of cell differentiation BP
GO:0045597 positive regulation of cell differentiation BP
GO:0045664 regulation of neuron differentiation BP
GO:0045666 positive regulation of neuron differentiation BP
GO:0045927 positive regulation of growth BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048638 regulation of developmental growth BP
GO:0048639 positive regulation of developmental growth BP
GO:0048699 generation of neurons BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050767 regulation of neurogenesis BP
GO:0050769 positive regulation of neurogenesis BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051049 regulation of transport BP
GO:0051050 positive regulation of transport BP
GO:0051094 positive regulation of developmental process BP
GO:0051128 regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051248 negative regulation of protein metabolic process BP
GO:0051270 obsolete regulation of cellular component movement BP
GO:0051272 obsolete positive regulation of cellular component movement BP
GO:0051336 regulation of hydrolase activity BP
GO:0051345 positive regulation of hydrolase activity BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0051960 regulation of nervous system development BP
GO:0051962 positive regulation of nervous system development BP
GO:0060191 regulation of lipase activity BP
GO:0060193 positive regulation of lipase activity BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060284 regulation of cell development BP
GO:0060341 regulation of cellular localization BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071216 cellular response to biotic stimulus BP
GO:0071219 cellular response to molecule of bacterial origin BP
GO:0071222 cellular response to lipopolysaccharide BP
GO:0071310 cellular response to organic substance BP
GO:0071396 cellular response to lipid BP
GO:0071704 organic substance metabolic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0098693 regulation of synaptic vesicle cycle BP
GO:0120035 regulation of plasma membrane bounded cell projection organization BP
GO:1900044 regulation of protein K63-linked ubiquitination BP
GO:1900045 negative regulation of protein K63-linked ubiquitination BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901568 fatty acid derivative metabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1902914 regulation of protein polyubiquitination BP
GO:1902915 negative regulation of protein polyubiquitination BP
GO:1903320 regulation of protein modification by small protein conjugation or removal BP
GO:1903321 negative regulation of protein modification by small protein conjugation or removal BP
GO:1903421 regulation of synaptic vesicle recycling BP
GO:1903423 positive regulation of synaptic vesicle recycling BP
GO:1903859 regulation of dendrite extension BP
GO:1903861 positive regulation of dendrite extension BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000145 regulation of cell motility BP
GO:2000147 positive regulation of cell motility BP
GO:2001222 regulation of neuron migration BP
GO:2001224 positive regulation of neuron migration BP
KEGG Term Name Description
map04141 Protein processing in endoplasmic reticulum The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.