PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC118059665 View in Genome Browser
Position	NW_023271728.1:315775-321390 (-) 5615bp
Gene Type	gene
Gene Description (Protein Product)	DA1-related
Organism	Populus alba
Also AS	Potri.010G197500AT2G39830Potri.010G197500.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC118062990 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

gene-LOC118061781 Ubiquitin-2 like Rad60 SUMO-like

gene-LOC118063087 ubiquitin-60S ribosomal protein

Regulatory gene

gene-LOC118027806 Cyclic dof factor

gene-LOC118027982 B3 DNA binding domain

gene-LOC118027984 B3 DNA binding domain

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0009888	tissue development	BP
GO:0010087	phloem or xylem histogenesis	BP
GO:0010088	phloem development	BP
GO:0022622	root system development	BP
GO:0032182	ubiquitin-like protein binding	MF
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0043130	ubiquitin binding	MF
GO:0048364	root development	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0099402	plant organ development	BP