Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118059700
View in Genome Browser
Position
NW_023271728.1:643235-648444 (+)
5209bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the actin family
Organism
Populus alba
Also AS Potri.010G202000AT3G12380Potri.010G202000.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118061566
gene-LOC118061566 Belongs to the actin family
gene-LOC118063103 N-terminal region of micro-spherule protein
Regulatory gene
gene-LOC118027467 NAC domain-containing protein
gene-LOC118027528 NAC domain-containing protein
gene-LOC118027806 Cyclic dof factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005200 structural constituent of cytoskeleton MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006281 DNA repair BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009888 tissue development BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010015 root morphogenesis BP
GO:0010073 meristem maintenance BP
GO:0010075 regulation of meristem growth BP
GO:0010082 regulation of root meristem growth BP
GO:0010646 regulation of cell communication BP
GO:0016043 cellular component organization BP
GO:0022622 root system development BP
GO:0023051 regulation of signaling BP
GO:0030029 actin filament-based process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033554 cellular response to stress BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0040008 regulation of growth BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0048364 root development BP
GO:0048507 meristem development BP
GO:0048509 regulation of meristem development BP
GO:0048583 regulation of response to stimulus BP
GO:0048638 regulation of developmental growth BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051716 cellular response to stimulus BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080036 regulation of cytokinin-activated signaling pathway BP
GO:0090304 nucleic acid metabolic process BP
GO:0099402 plant organ development BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1905392 plant organ morphogenesis BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000280 regulation of root development BP