Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118062006
View in Genome Browser
Position
NW_023271789.1:1031947-1037508 (-)
5561bp
Gene Type
gene
Gene Description (Protein Product)
"Protein present in Fab1
Organism
Populus alba
Also AS Potri.005G242700AT1G20110Potri.005G242700.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118062990 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
gene-LOC118062409 Autophagy-related protein
gene-LOC118063087 ubiquitin-60S ribosomal protein
Regulatory gene
gene-LOC118027665 transcription factor
gene-LOC118027806 Cyclic dof factor
gene-LOC118028055 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0006950 response to stress BP
GO:0006970 response to osmotic stress BP
GO:0006972 hyperosmotic response BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009408 response to heat BP
GO:0009628 response to abiotic stimulus BP
GO:0012505 endomembrane system CC
GO:0030139 endocytic vesicle CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0044352 pinosome CC
GO:0044354 macropinosome CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045335 phagocytic vesicle CC
GO:0050896 response to stimulus BP
GO:0097708 intracellular vesicle CC