Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118062240
View in Genome Browser
Position
NW_023271789.1:2728170-2733342 (+)
5172bp
Gene Type
gene
Gene Description (Protein Product)
F-box LRR-repeat protein
Organism
Populus alba
Also AS Potri.005G218400AT3G54650Potri.005G218400.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118062764 Belongs to the protein kinase superfamily
gene-LOC118062838 Belongs to the protein kinase superfamily
gene-LOC118063183 Ribonucleoside-diphosphate reductase small
Regulatory gene
gene-LOC118027982 B3 DNA binding domain
gene-LOC118027984 B3 DNA binding domain
gene-LOC118028111 B3 domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000151 ubiquitin ligase complex CC
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0001673 male germ cell nucleus CC
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0007275 multicellular organism development BP
GO:0007276 gamete generation BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009555 pollen development BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0010498 proteasomal protein catabolic process BP
GO:0016043 cellular component organization BP
GO:0019005 SCF ubiquitin ligase complex CC
GO:0019538 protein metabolic process BP
GO:0019941 modification-dependent protein catabolic process BP
GO:0019953 sexual reproduction BP
GO:0022402 cell cycle process BP
GO:0022412 cellular process involved in reproduction in multicellular organism BP
GO:0022414 reproductive process BP
GO:0030163 protein catabolic process BP
GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process BP
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032991 protein-containing complex CC
GO:0043073 germ cell nucleus CC
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0048229 gametophyte development BP
GO:0048232 male gamete generation BP
GO:0048285 organelle fission BP
GO:0048316 seed development BP
GO:0048608 reproductive structure development BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051704 obsolete multi-organism process BP
GO:0055047 generative cell mitosis BP
GO:0061458 reproductive system development BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0140014 mitotic nuclear division BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1902494 catalytic complex CC
GO:1903047 mitotic cell cycle process BP
GO:1990234 transferase complex CC