PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	gene-LOC118062473 View in Genome Browser
Position	NW_023271792.1:1312729-1317896 (+) 5167bp
Gene Type	gene
Gene Description (Protein Product)	Animal haem peroxidase
Organism	Populus alba
Also AS	Potri.008G106400AT3G01420Potri.008G106400.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-LOC118063407 Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding gene-LOC118062674 Cytochrome p450
Regulatory gene	gene-LOC118027693 transcription factor gene-LOC118027738 Myb-related protein gene-LOC118027779 transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000302	response to reactive oxygen species	BP
GO:0001101	response to acid chemical	BP
GO:0001516	prostaglandin biosynthetic process	BP
GO:0001561	fatty acid alpha-oxidation	BP
GO:0001676	long-chain fatty acid metabolic process	BP
GO:0002376	immune system process	BP
GO:0003008	system process	BP
GO:0003013	circulatory system process	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004601	peroxidase activity	MF
GO:0004666	prostaglandin-endoperoxide synthase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005789	endoplasmic reticulum membrane	CC
GO:0005794	Golgi apparatus	CC
GO:0005811	lipid droplet	CC
GO:0006082	organic acid metabolic process	BP
GO:0006629	lipid metabolic process	BP
GO:0006631	fatty acid metabolic process	BP
GO:0006633	fatty acid biosynthetic process	BP
GO:0006636	unsaturated fatty acid biosynthetic process	BP
GO:0006690	icosanoid metabolic process	BP
GO:0006692	prostanoid metabolic process	BP
GO:0006693	prostaglandin metabolic process	BP
GO:0006805	xenobiotic metabolic process	BP
GO:0006950	response to stress	BP
GO:0006952	defense response	BP
GO:0006955	immune response	BP
GO:0006979	response to oxidative stress	BP
GO:0008015	blood circulation	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008217	regulation of blood pressure	BP
GO:0008219	cell death	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009056	catabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009062	fatty acid catabolic process	BP
GO:0009410	response to xenobiotic stimulus	BP
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009617	response to bacterium	BP
GO:0009620	response to fungus	BP
GO:0009627	systemic acquired resistance	BP
GO:0009636	response to toxic substance	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009737	response to abscisic acid	BP
GO:0009751	response to salicylic acid	BP
GO:0009814	defense response to other organism	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010035	response to inorganic substance	BP
GO:0012505	endomembrane system	CC
GO:0012511	monolayer-surrounded lipid storage body	CC
GO:0014070	response to organic cyclic compound	BP
GO:0016020	membrane	CC
GO:0016042	lipid catabolic process	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0016054	organic acid catabolic process	BP
GO:0016209	antioxidant activity	MF
GO:0016491	oxidoreductase activity	MF
GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	MF
GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	MF
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	MF
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	MF
GO:0019369	arachidonic acid metabolic process	BP
GO:0019371	cyclooxygenase pathway	BP
GO:0019395	fatty acid oxidation	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0030258	lipid modification	BP
GO:0031090	organelle membrane	CC
GO:0031984	organelle subcompartment	CC
GO:0032501	multicellular organismal process	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0032870	cellular response to hormone stimulus	BP
GO:0033554	cellular response to stress	BP
GO:0033559	unsaturated fatty acid metabolic process	BP
GO:0033993	response to lipid	BP
GO:0034440	lipid oxidation	BP
GO:0034599	cellular response to oxidative stress	BP
GO:0034614	cellular response to reactive oxygen species	BP
GO:0035690	cellular response to xenobiotic stimulus	BP
GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	CC
GO:0042221	response to chemical	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0042742	defense response to bacterium	BP
GO:0042759	long-chain fatty acid biosynthetic process	BP
GO:0043207	response to external biotic stimulus	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044242	cellular lipid catabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044432	obsolete endoplasmic reticulum part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0045087	innate immune response	BP
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0046395	carboxylic acid catabolic process	BP
GO:0046456	icosanoid biosynthetic process	BP
GO:0046457	prostanoid biosynthetic process	BP
GO:0046677	response to antibiotic	BP
GO:0050832	defense response to fungus	BP
GO:0050896	response to stimulus	BP
GO:0051213	dioxygenase activity	MF
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0051716	cellular response to stimulus	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071229	cellular response to acid chemical	BP
GO:0071236	cellular response to antibiotic	BP
GO:0071241	cellular response to inorganic substance	BP
GO:0071310	cellular response to organic substance	BP
GO:0071407	cellular response to organic cyclic compound	BP
GO:0071446	cellular response to salicylic acid stimulus	BP
GO:0071466	cellular response to xenobiotic stimulus	BP
GO:0071495	cellular response to endogenous stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0071731	response to nitric oxide	BP
GO:0071732	cellular response to nitric oxide	BP
GO:0072329	monocarboxylic acid catabolic process	BP
GO:0072330	monocarboxylic acid biosynthetic process	BP
GO:0097237	cellular response to toxic substance	BP
GO:0097305	response to alcohol	BP
GO:0097366	response to bronchodilator	BP
GO:0098542	defense response to other organism	BP
GO:0098754	detoxification	BP
GO:0098827	endoplasmic reticulum subcompartment	CC
GO:0098869	cellular oxidant detoxification	BP
GO:1901568	fatty acid derivative metabolic process	BP
GO:1901570	fatty acid derivative biosynthetic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901617	organic hydroxy compound biosynthetic process	BP
GO:1901698	response to nitrogen compound	BP
GO:1901699	cellular response to nitrogen compound	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1901701	cellular response to oxygen-containing compound	BP
GO:1902170	cellular response to reactive nitrogen species	BP
GO:1902609	(R)-2-hydroxy-alpha-linolenic acid biosynthetic process	BP
GO:1990748	cellular detoxification	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map00592	alpha-Linolenic acid metabolism	-