Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118062573
View in Genome Browser
Position
NW_023271793.1:100841-105585 (-)
4744bp
Gene Type
gene
Gene Description (Protein Product)
Ubiquitin-like modifier-activating enzyme
Organism
Populus alba
Also AS Potri.004G055600AT5G45900Potri.004G055600.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118062744 NEDD8-activating enzyme E1 catalytic
gene-LOC118063088 Belongs to the ubiquitin-conjugating enzyme family
gene-LOC118063087 ubiquitin-60S ribosomal protein
Regulatory gene
gene-LOC118027806 Cyclic dof factor
gene-LOC118027982 B3 DNA binding domain
gene-LOC118027984 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000045 autophagosome assembly BP
GO:0000407 phagophore assembly site CC
GO:0000422 autophagy of mitochondrion BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006464 protein modification process BP
GO:0006497 protein lipidation BP
GO:0006501 C-terminal protein lipidation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006914 autophagy BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006995 cellular response to nitrogen starvation BP
GO:0006996 organelle organization BP
GO:0007005 mitochondrion organization BP
GO:0007033 vacuole organization BP
GO:0007154 cell communication BP
GO:0007275 multicellular organism development BP
GO:0007568 aging BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008641 ubiquitin-like modifier activating enzyme activity MF
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009267 cellular response to starvation BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009620 response to fungus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010150 leaf senescence BP
GO:0016043 cellular component organization BP
GO:0016236 macroautophagy BP
GO:0016237 lysosomal microautophagy BP
GO:0016740 transferase activity MF
GO:0016874 ligase activity MF
GO:0016877 ligase activity, forming carbon-sulfur bonds MF
GO:0018410 C-terminal protein amino acid modification BP
GO:0019538 protein metabolic process BP
GO:0019778 Atg12 activating enzyme activity MF
GO:0019779 Atg8 activating enzyme activity MF
GO:0022411 cellular component disassembly BP
GO:0022607 cellular component assembly BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033554 cellular response to stress BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0034727 piecemeal microautophagy of the nucleus BP
GO:0036211 protein modification process BP
GO:0042157 lipoprotein metabolic process BP
GO:0042158 lipoprotein biosynthetic process BP
GO:0042594 response to starvation BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043412 macromolecule modification BP
GO:0043562 cellular response to nitrogen levels BP
GO:0043687 post-translational protein modification BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044804 autophagy of nucleus BP
GO:0044805 late nucleophagy BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0050832 defense response to fungus BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0061726 mitochondrion disassembly BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0070925 organelle assembly BP
GO:0071496 cellular response to external stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090693 plant organ senescence BP
GO:0098542 defense response to other organism BP
GO:0099402 plant organ development BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1903008 organelle disassembly BP
GO:1905037 autophagosome organization BP