Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC118062661
View in Genome Browser
Position
NW_023271805.1:47306-50206 (+)
2900bp
Gene Type
gene
Gene Description (Protein Product)
D-tyrosyl-tRNA(Tyr) deacylase
Organism
Populus alba
Also AS Potri.011G062200AT4G18460Potri.011G062200.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC118062986 tetraacyldisaccharide
gene-LOC118063406 V-type proton ATPase subunit
gene-LOC118063316 Belongs to the small GTPase superfamily. Arf family
Regulatory gene
gene-LOC118027806 Cyclic dof factor
gene-LOC118028055 Dof zinc finger protein
gene-LOC118028114 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002161 aminoacyl-tRNA editing activity MF
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006082 organic acid metabolic process BP
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006399 tRNA metabolic process BP
GO:0006450 regulation of translational fidelity BP
GO:0006520 amino acid metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009063 amino acid catabolic process BP
GO:0009987 cellular process BP
GO:0016054 organic acid catabolic process BP
GO:0016070 RNA metabolic process BP
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0019478 D-amino acid catabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046395 carboxylic acid catabolic process BP
GO:0046416 D-amino acid metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0051499 D-aminoacyl-tRNA deacylase activity MF
GO:0051500 D-tyrosyl-tRNA(Tyr) deacylase activity MF
GO:0052689 carboxylic ester hydrolase activity MF
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0106074 aminoacyl-tRNA metabolism involved in translational fidelity BP
GO:0140098 catalytic activity, acting on RNA MF
GO:0140101 catalytic activity, acting on a tRNA MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901606 alpha-amino acid catabolic process BP