Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_000257
View in Genome Browser
Position
CM027582.1:2179554-2182010 (+)
2456bp
Gene Type
gene
Gene Description (Protein Product)
Zinc finger protein
Organism
Populus deltoides
Also AS Podel.13G116300AT1G72050Potri.013G108600.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_016834 Protein phosphatase 2C and cyclic nucleotide-binding kinase domain-containing
gene-H0E87_005417 -
gene-H0E87_018550 Guanine nucleotide-binding protein subunit
Regulatory gene
gene-H0E87_006715 Protein tesmin TSO1-like CXC
gene-H0E87_012190 Protein tesmin TSO1-like CXC
gene-H0E87_014862 tesmin TSO1-like CXC
Target gene
gene-H0E87_000094 DEAD DEAH box RNA helicase family protein
gene-H0E87_000105 Double-stranded RNA-binding protein
gene-H0E87_000110 TMV resistance protein N-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0003723 RNA binding MF
GO:0005488 binding MF
GO:0006355 regulation of DNA-templated transcription BP
GO:0008097 5S rRNA binding MF
GO:0008150 biological_process BP
GO:0009889 regulation of biosynthetic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019843 rRNA binding MF
GO:0022613 ribonucleoprotein complex biogenesis BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0042254 ribosome biogenesis BP
GO:0042273 ribosomal large subunit biogenesis BP
GO:0044085 cellular component biogenesis BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0140110 transcription regulator activity MF
GO:1901363 heterocyclic compound binding MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP