Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
gene-H0E87_000906
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Position
CM027582.1:5989532-5999004 (-)
9472bp
Gene Type
gene
Gene Description (Protein Product)
F-box LRR-repeat protein 3-like
Organism
Populus deltoides
Also AS Podel.13G193700AT2G30260Potri.013G153801.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_013373 Small nuclear ribonucleoprotein
gene-H0E87_006960 Small nuclear ribonucleoprotein
gene-H0E87_029449 Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region
Regulatory gene
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001832 Dof zinc finger protein
gene-H0E87_001933 Dof zinc finger protein DOF4.6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)