Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_014929
View in Genome Browser
Position
CM027575.1:3597430-3603317 (-)
5887bp
Gene Type
gene
Gene Description (Protein Product)
Exonuclease 3'-5' domain-containing protein
Organism
Populus deltoides
Also AS Podel.06G246800AT2G25910Potri.006G234000.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_020648 Dynein light chain
gene-H0E87_029434 Dynein light chain type 1
gene-H0E87_020718 Dynein light chain
Regulatory gene
gene-H0E87_000145 NAC domain-containing protein
gene-H0E87_000534 NAC transcription factor
gene-H0E87_000883 NAC domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010468 regulation of gene expression BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010629 negative regulation of gene expression BP
GO:0016070 RNA metabolic process BP
GO:0016458 obsolete gene silencing BP
GO:0019222 regulation of metabolic process BP
GO:0031047 RNA-mediated gene silencing BP
GO:0032991 protein-containing complex CC
GO:0034587 piRNA processing BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0035770 ribonucleoprotein granule CC
GO:0036464 cytoplasmic ribonucleoprotein granule CC
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043170 macromolecule metabolic process BP
GO:0043186 P granule CC
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045495 pole plasm CC
GO:0046483 heterocycle metabolic process BP
GO:0046983 protein dimerization activity MF
GO:0048519 negative regulation of biological process BP
GO:0050789 regulation of biological process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060293 germ plasm CC
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1990904 ribonucleoprotein complex CC
GO:1990923 PET complex CC